Metadata-Version: 1.0
Name: cfDNApipe
Version: 1.0.2
Summary: An Intergrated Pipeline For cfDNA Sequencing Data Analysis
Home-page: https://github.com/Honchkrow/cfDNApipe
Author: Wei Zhang, Jiaqi Huang, Shuying He, Juhong Liu, Yu Liu
Author-email: w-zhang16@mail.tsinghua.edu.cn
License: Please see LICENSE.txt.
Description: # cfDNA-Pipeline
        Cell Free DNA Sequencing Analysis Pipeline
        
        
        # News
        version 0.0.1, 2019.06.01
        The first test version.
        
        version 0.0.4, 2019.11.24
        Add functions to check the reference folder when setting configure.
        
        version 0.0.8, 2020.06.12
        Add pipeline analysis function. Include WGS/WGBS paired/single data pipeline 
        and case control comparison analysis pipeline.
        
        version 0.0.9, 2020.06.17
        Delete useless folders, remove stepBase2.
        
        version 0.1.0, 2020.06.22
        Add pipeline for basic WGS/WGBS and case/control analysis.
        
        version 0.1.1, 2020.06.22
        Add qualimap function.
        
        version 0.1.3, 2020.12.01
        Archive some functions.
        
        version 0.1.5, 2021.01.05
        Pre release.
        
        version 0.1.6, 2021.01.05
        Pre release again.
        
        version 0.1.7, 2021.01.11
        update report 
        
        version 0.1.8, 2021.01.11
        fix virus genome error
        
        version 0.1.9, 2021.01.15
        test data check
        
        version 1.0.0, 2021.01.16
        release
        
        version 1.0.1, 2021.01.16
        add nucleosome positioning and tissue of origin function
        
        version 1.0.2, 2021.01.16
        update readme and tutorial, fix some bugs
Keywords: cell free DNA,WGS,WGBS,Fragmentation,Methylation,Virus,SNV,CNV
Platform: Linux/Unix
